Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_001949 | Not Available | Positive | 1060089 - 1061417 | 51424.8 |
| hypothetical protein | VDA_001950 | Not Available | Positive | 1061407 - 1062723 | 50554.5 |
| hypothetical protein | VDA_001951 | Not Available | Positive | 1062724 - 1063767 | 39268.6 |
| peptidase s8 and s53 subtilisin kexin sedolisin | VDA_001952 | Not Available | Negative | 1064002 - 1065141 | 39531.3 |
| putative abc transporter atp-binding protein | VDA_001953 | Not Available | Positive | 1065366 - 1066961 | 59641.6 |
| predicted hydrolase | VDA_001954 | Not Available | Positive | 1067168 - 1068982 | 70050.3 |
| hypothetical nucleoside-diphosphate-sugar epimerase | VDA_001955 | Not Available | Negative | 1070810 - 1072273 | 55127.0 |
| na(+) driven multidrug efflux pump | VDA_001956 | Not Available | Positive | 1072500 - 1073867 | 49582.1 |
| putative abc transporter atp-binding protein | VDA_001957 | Not Available | Positive | 1074201 - 1074872 | 24623.9 |
| abc-type antimicrobial peptide transport system permease component | VDA_001958 | Not Available | Positive | 1074853 - 1077318 | 91471.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


