Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-phosphofructokinase | VDA_001939 | Not Available | Positive | 1047123 - 1048070 | 33524.0 |
| phosphotransferase system fructose-specific iib and iic subunit | VDA_001940 | Not Available | Positive | 1048173 - 1049819 | 56691.8 |
| probable sensor/response regulator hybrid | VDA_001941 | Not Available | Positive | 1050164 - 1052080 | 72500.7 |
| peptide deformylase | VDA_001942 | Not Available | Positive | 1052263 - 1052778 | 19345.5 |
| putative potassium channel related protein | VDA_001943 | Not Available | Negative | 1052834 - 1053973 | 43443.9 |
| hypothetical protein | VDA_001944 | Not Available | Negative | 1054001 - 1054945 | 35305.3 |
| anhydro-n-acetylmuramic acid kinase (anhmurnac kinase) | VDA_001945 | Not Available | Negative | 1055049 - 1056173 | 40800.2 |
| transcriptional regulator | VDA_001946 | Not Available | Negative | 1056204 - 1057136 | 34457.2 |
| 2-amino-3-ketobutyrate coenzyme a ligase | VDA_001947 | Not Available | Positive | 1057347 - 1058540 | 43076.4 |
| l-threonine 3-dehydrogenase | VDA_001948 | Not Available | Positive | 1058543 - 1059574 | 37675.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


