Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric iron abc transporter atp-binding protein | VDA_001208 | Not Available | Positive | 48368 - 49408 | 38081.0 |
| quorum-sensing regulator of virulence hapr | VDA_001209 | Not Available | Negative | 49482 - 50078 | 22813.3 |
| hypoxanthine-guanine phosphoribosyltransferase | VDA_001210 | Not Available | Positive | 50299 - 50835 | 20450.6 |
| carbonic anhydrase | VDA_001211 | Not Available | Negative | 50910 - 51581 | 24922.7 |
| hypothetical abc transporter atp-binding protein yadg | VDA_001212 | Not Available | Positive | 51680 - 52603 | 34370.8 |
| abc-type multidrug transport system permease component | VDA_001213 | Not Available | Positive | 52600 - 53370 | 28105.1 |
| pantoate--beta-alanine ligase | VDA_001214 | Not Available | Negative | 53486 - 54376 | 33323.2 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | VDA_001215 | Not Available | Negative | 54386 - 55180 | 28723.8 |
| poly(a) polymerase | VDA_001216 | Not Available | Negative | 55688 - 56980 | 50146.0 |
| glutamyl-q-trna synthetase | VDA_001217 | Not Available | Negative | 57193 - 58212 | 38248.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


