Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_001899 | Not Available | Positive | 992382 - 993017 | 24146.9 |
| putative sodium/alanine symporter | VDA_001900 | Not Available | Negative | 993652 - 995058 | 49740.7 |
| chitinase | VDA_001901 | Not Available | Negative | 995564 - 996874 | 48859.0 |
| hypothetical transcription regulator | VDA_001902 | Not Available | Positive | 997327 - 998031 | 26691.1 |
| hypothetical acrb/acrd/acrf family protein | VDA_001903 | Not Available | Negative | 998023 - 1001118 | 112970.0 |
| hypothetical protein | VDA_001904 | Not Available | Negative | 1001111 - 1002202 | 40459.8 |
| hypothetical transcriptional regulator tetr family | VDA_001905 | Not Available | Positive | 1002367 - 1002996 | 23809.8 |
| hypothetical outer membrane lipoprotein | VDA_001906 | Not Available | Positive | 1003342 - 1003527 | 6232.37 |
| accessory colonization factor acfd precursor | VDA_001907 | Not Available | Positive | 1004417 - 1008946 | 168709.0 |
| tsga protein | VDA_001908 | Not Available | Negative | 1009030 - 1010217 | 43683.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


