Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vitamin b12 abc transporter atpase component btud | VDA_001889 | Not Available | Positive | 978089 - 978853 | 27842.1 |
| rna methyltransferase trma family | VDA_001890 | Not Available | Positive | 978952 - 980091 | 42454.2 |
| hypothetical membrane protein | VDA_001891 | Not Available | Negative | 980145 - 981188 | 40188.9 |
| putative membrane/transport protein | VDA_001892 | Not Available | Negative | 981361 - 983019 | 58742.2 |
| hypothetical protein | VDA_001893 | Not Available | Negative | 983484 - 984170 | 25680.8 |
| ribonucleotide reductase of class ii (coenzyme b12-dependent) | VDA_001894 | Not Available | Negative | 984199 - 986349 | 80484.5 |
| hypothetical major outer membrane protein ompu | VDA_001895 | Not Available | Negative | 986787 - 987797 | 37385.4 |
| hypothetical protein | VDA_001896 | Not Available | Negative | 988111 - 989136 | 37083.4 |
| thiol-disulfide isomerase | VDA_001897 | Not Available | Negative | 989464 - 990090 | 23379.1 |
| putative heat shock protein yegd | VDA_001898 | Not Available | Positive | 990344 - 991696 | 50107.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


