Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_001879 | Not Available | Positive | 965197 - 965745 | 21336.3 |
| hypothetical protein | VDA_001880 | Not Available | Positive | 965748 - 966572 | 31420.3 |
| glycosaminoglycan attachment site | VDA_001881 | Not Available | Positive | 968082 - 969101 | 38621.8 |
| hypothetical protein | VDA_001882 | Not Available | Positive | 969215 - 970141 | 34611.9 |
| hypothetical protein | VDA_001883 | Not Available | Negative | 970958 - 971209 | 9071.67 |
| phenylalanyl-trna synthetase alpha chain | VDA_001884 | Not Available | Positive | 971510 - 972493 | 37280.4 |
| phenylalanyl-trna synthetase beta chain | VDA_001885 | Not Available | Positive | 972513 - 974900 | 86314.5 |
| integration host factor alpha subunit | VDA_001886 | Not Available | Positive | 975501 - 975719 | 8329.07 |
| succinylglutamate desuccinylase | VDA_001887 | Not Available | Positive | 975982 - 977013 | 38944.2 |
| vitamin b12 import system permease protein btuc | VDA_001888 | Not Available | Positive | 977097 - 978092 | 35707.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


