Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ycar | VDA_001869 | Not Available | Positive | 951155 - 951334 | 6686.06 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | VDA_001870 | Not Available | Positive | 951336 - 952082 | 27745.9 |
| hypothetical sigma-54 modulation protein | VDA_001871 | Not Available | Negative | 952183 - 952428 | 9184.92 |
| putative sodium/dicarboxylate symporter | VDA_001872 | Not Available | Negative | 952886 - 954280 | 48678.5 |
| membrane protein functionally coupled to the mukbef chromosome partitioning mechanism | VDA_001873 | Not Available | Negative | 954610 - 955446 | 30984.9 |
| s-adenosylmethionine-dependent methyltransferase functionally coupled to the mukbef chromosome partitioning mechanism | VDA_001874 | Not Available | Positive | 955569 - 956366 | 30280.7 |
| chromosome partition protein mukf | VDA_001875 | Not Available | Positive | 956385 - 957707 | 50427.7 |
| chromosome partition protein muke | VDA_001876 | Not Available | Positive | 957688 - 958437 | 28393.7 |
| chromosome partition protein mukb | VDA_001877 | Not Available | Positive | 958731 - 962897 | 158270.0 |
| hypothetical protein | VDA_001878 | Not Available | Negative | 963052 - 963984 | 36218.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


