Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor protein tyrr | VDA_001819 | Not Available | Positive | 881127 - 882668 | 58179.6 |
| ribosomal-protein-s5p-alanine acetyltransferase | VDA_001820 | Not Available | Positive | 883326 - 883922 | 23513.2 |
| pyruvate kinase | VDA_001821 | Not Available | Negative | 884048 - 885493 | 51452.3 |
| transcriptional regulator | VDA_001822 | Not Available | Negative | 885894 - 886748 | 31504.7 |
| hypothetical enzyme of sugar metabolism | VDA_001823 | Not Available | Positive | 887126 - 887974 | 31249.6 |
| hypothetical carboxypeptidase g2 | VDA_001824 | Not Available | Positive | 888895 - 890025 | 40837.6 |
| predicted transcriptional regulator for fatty acid degradation fadq tetr family | VDA_001825 | Not Available | Positive | 890344 - 891012 | 25304.5 |
| acyl-coa dehydrogenase short-chain specific | VDA_001826 | Not Available | Positive | 891129 - 893405 | 83132.9 |
| short-chain alcohol dehydrogenase family | VDA_001827 | Not Available | Positive | 893598 - 894800 | 44204.6 |
| sensor protein phoq | VDA_001828 | Not Available | Negative | 894874 - 896220 | 50630.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


