Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leader peptidase (prepilin peptidase)/n-methyltransferase | VDA_001188 | Not Available | Negative | 18622 - 19500 | 32502.8 |
| type 4 fimbrial assembly protein pilc | VDA_001189 | Not Available | Negative | 19683 - 20909 | 45045.0 |
| type 4 fimbrial assembly atpase pilb | VDA_001190 | Not Available | Negative | 20975 - 22666 | 62497.9 |
| type iv pilin pila | VDA_001191 | Not Available | Negative | 22667 - 23182 | 17910.2 |
| n-acetylmuramoyl-l-alanine amidase ampd | VDA_001192 | Not Available | Positive | 23570 - 24148 | 21480.3 |
| transcriptional repressor for pyruvate dehydrogenase complex | VDA_001193 | Not Available | Positive | 24508 - 25281 | 29662.5 |
| pyruvate dehydrogenase e1 component | VDA_001194 | Not Available | Positive | 25362 - 28022 | 99298.9 |
| dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex | VDA_001195 | Not Available | Positive | 28035 - 29912 | 65128.0 |
| dihydrolipoamide dehydrogenase | VDA_001196 | Not Available | Positive | 30090 - 31520 | 50912.8 |
| hypothetical protein | VDA_001197 | Not Available | Negative | 32162 - 34228 | 74171.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


