Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin synthase | VDA_001674 | Not Available | Negative | 672568 - 673371 | 29548.7 |
| sulfate permease | VDA_001677 | Not Available | Negative | 674530 - 676086 | 55181.8 |
| ribonuclease e | VDA_001678 | Not Available | Negative | 676394 - 679681 | 124085.0 |
| ribosomal large subunit pseudouridine synthase c | VDA_001679 | Not Available | Positive | 680187 - 681221 | 39365.2 |
| maf/ycef/yhde family protein | VDA_001680 | Not Available | Negative | 681300 - 681896 | 22056.5 |
| hypothetical protein yced (clustered with ribosomal protein l32p) | VDA_001681 | Not Available | Positive | 682526 - 682759 | 8557.98 |
| lsu ribosomal protein l32p | VDA_001682 | Not Available | Positive | 682782 - 682952 | 6207.5 |
| phosphate:acyl-acp acyltransferase plsx | VDA_001683 | Not Available | Positive | 682965 - 683987 | 36673.1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase kasiii | VDA_001684 | Not Available | Positive | 683993 - 684949 | 33914.4 |
| malonyl coa-acyl carrier protein transacylase | VDA_001685 | Not Available | Positive | 685081 - 686010 | 32439.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


