Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide transport system permease protein oppc | VDA_001634 | Not Available | Positive | 619417 - 620331 | 33903.0 |
| oligopeptide transport atp-binding protein oppd | VDA_001635 | Not Available | Positive | 620405 - 621376 | 35941.0 |
| oligopeptide transport atp-binding protein oppf | VDA_001636 | Not Available | Positive | 621370 - 622356 | 36161.5 |
| putative two-component response regulator and ggdef family protein yeaj | VDA_001637 | Not Available | Negative | 622442 - 623995 | 60120.2 |
| hypothetical protein | VDA_001638 | Not Available | Negative | 624000 - 624935 | 35194.0 |
| hypothetical protein | VDA_001639 | Not Available | Negative | 625178 - 626311 | 43279.6 |
| nitric oxide reductase flrd-nad(+) reductase | VDA_001640 | Not Available | Negative | 626997 - 628148 | 41409.8 |
| anaerobic nitric oxide reductase flavorubredoxin | VDA_001641 | Not Available | Negative | 628173 - 629660 | 55456.8 |
| adenylosuccinate lyase | VDA_001642 | Not Available | Negative | 629924 - 631291 | 51290.3 |
| hypothetical protein | VDA_001643 | Not Available | Negative | 631374 - 631994 | 22932.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


