Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent glyceraldehyde-3-phosphate dehydrogenase | VDA_001583 | Not Available | Negative | 553574 - 554569 | 35235.9 |
| hypothetical protein | VDA_001584 | Not Available | Negative | 555377 - 556228 | 33223.7 |
| l-asparaginase | VDA_001585 | Not Available | Negative | 556793 - 557758 | 35114.3 |
| protease iv | VDA_001586 | Not Available | Negative | 558079 - 559932 | 67444.7 |
| protein ydja | VDA_001588 | Not Available | Positive | 562281 - 562829 | 19700.8 |
| selenide,water dikinase | VDA_001589 | Not Available | Positive | 563030 - 564064 | 36351.6 |
| selenophosphate-dependent trna 2-selenouridine synthase | VDA_001590 | Not Available | Positive | 564064 - 565158 | 41525.6 |
| hypothetical protein | VDA_001591 | Not Available | Negative | 565252 - 566091 | 31509.9 |
| dna topoisomerase iii | VDA_001592 | Not Available | Positive | 566255 - 568243 | 73671.6 |
| hypothetical protein | VDA_001593 | Not Available | Negative | 568285 - 569901 | 62281.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


