Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | VDA_001563 | Not Available | Positive | 528072 - 528896 | 30320.3 |
| o-succinylbenzoate-coa synthase | VDA_001564 | Not Available | Positive | 528949 - 529923 | 35702.8 |
| o-succinylbenzoic acid--coa ligase | VDA_001565 | Not Available | Positive | 529911 - 531341 | 53004.6 |
| lysophospholipid transporter lplt/2-acylglycerophosphoethanolamine acyltransferase/acyl-[acyl-carrier-protein] synthetase | VDA_001566 | Not Available | Negative | 531426 - 533303 | 69555.7 |
| transcriptional regulator | VDA_001567 | Not Available | Negative | 533318 - 533683 | 13938.5 |
| hypothetical protein | VDA_001568 | Not Available | Positive | 534547 - 535365 | 29867.6 |
| dna-binding protein inhibitor id-2-related protein | VDA_001569 | Not Available | Positive | 535617 - 535862 | 8869.73 |
| hypothetical protein | VDA_001570 | Not Available | Positive | 536402 - 536839 | 16941.7 |
| hypothetical protein | VDA_001571 | Not Available | Positive | 537351 - 538202 | 31279.8 |
| 3',5'-cyclic-nucleotide phosphodiesterase | VDA_001572 | Not Available | Negative | 538330 - 539313 | 36196.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


