Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase ppid | VDA_001553 | Not Available | Positive | 517226 - 518923 | 62658.5 |
| putative dna uptake protein | VDA_001554 | Not Available | Positive | 519086 - 519373 | 10446.8 |
| putative cytoplasmic protein | VDA_001555 | Not Available | Negative | 519458 - 519796 | 12737.9 |
| hypothetical protein | VDA_001556 | Not Available | Negative | 519883 - 520440 | 20366.0 |
| hypothetical protein | VDA_001557 | Not Available | Positive | 520450 - 521070 | 23194.9 |
| deoxyguanosinetriphosphate triphosphohydrolase | VDA_001558 | Not Available | Negative | 521268 - 522596 | 50817.7 |
| hypothetical protein | VDA_001559 | Not Available | Negative | 522596 - 523180 | 22336.8 |
| aspartate/tyrosine/aromatic aminotransferase | VDA_001560 | Not Available | Negative | 523290 - 524504 | 45463.1 |
| menaquinone-specific isochorismate synthase | VDA_001561 | Not Available | Positive | 524943 - 526340 | 52646.6 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | VDA_001562 | Not Available | Positive | 526406 - 528088 | 60693.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


