Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| utp--glucose-1-phosphate uridylyltransferase | VDA_001524 | Not Available | Positive | 473451 - 474341 | 32409.4 |
| transposase | VDA_001525 | Not Available | Negative | 474473 - 475681 | 46588.9 |
| n-acetylmuramoyl alanine amidase | VDA_001526 | Not Available | Positive | 475924 - 476559 | 24079.8 |
| transposase | VDA_001527 | Not Available | Positive | 476591 - 477799 | 46637.0 |
| metallo-beta-lactamase family protein rna-specific | VDA_001528 | Not Available | Positive | 478183 - 479610 | 52614.5 |
| 5-methylaminomethyl-2-thiouridine-forming enzyme mnmc | VDA_001529 | Not Available | Negative | 480623 - 482923 | 84846.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase kasi | VDA_001530 | Not Available | Positive | 483113 - 484327 | 42855.1 |
| udp-glucose dehydrogenase | VDA_001531 | Not Available | Positive | 485084 - 486250 | 43049.5 |
| erythronate-4-phosphate dehydrogenase | VDA_001532 | Not Available | Positive | 486417 - 487601 | 43317.1 |
| aspartate-semialdehyde dehydrogenase | VDA_001533 | Not Available | Positive | 487585 - 488598 | 37270.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


