Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_001504 | Not Available | Negative | 450166 - 452379 | 83339.9 |
| protein of unknown function duf1017 | VDA_001505 | Not Available | Negative | 452379 - 453197 | 30768.6 |
| hypothetical lipoprotein | VDA_001506 | Not Available | Negative | 453214 - 453915 | 25993.5 |
| hypothetical protein | VDA_001507 | Not Available | Negative | 454044 - 454271 | 6832.92 |
| putative capsular polysaccharide transport protein | VDA_001508 | Not Available | Positive | 455014 - 455994 | 35880.8 |
| low molecular weight protein-tyrosine-phosphatase wzb | VDA_001509 | Not Available | Positive | 456336 - 456623 | 10613.5 |
| tyrosine-protein kinase wzc | VDA_001510 | Not Available | Positive | 457199 - 459169 | 72174.3 |
| undecaprenyl-phosphate n-acetylglucosaminyl 1-phosphate transferase | VDA_001511 | Not Available | Positive | 459427 - 460509 | 39569.2 |
| o-antigen flippase wzx | VDA_001512 | Not Available | Positive | 460750 - 462213 | 56488.1 |
| hypothetical protein | VDA_001513 | Not Available | Positive | 462224 - 463201 | 38192.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


