Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_001470 | Not Available | Positive | 400279 - 400992 | 25897.3 |
| phosphoglycerate transport system transcription regulator | VDA_001471 | Not Available | Negative | 401041 - 402318 | 47900.1 |
| phosphoglycerate transport regulatory protein pgtb | VDA_001472 | Not Available | Negative | 402305 - 404674 | 89199.3 |
| phosphoglycerate transport regulatory protein pgtc | VDA_001473 | Not Available | Negative | 404678 - 405919 | 47337.9 |
| hypothetical protein | VDA_001474 | Not Available | Negative | 406132 - 406632 | 19843.6 |
| formate--tetrahydrofolate ligase | VDA_001475 | Not Available | Negative | 406972 - 408726 | 62041.3 |
| hypothetical protein | VDA_001476 | Not Available | Positive | 409105 - 409224 | 4250.37 |
| pyruvate formate-lyase activating enzyme | VDA_001477 | Not Available | Negative | 409320 - 409868 | 20959.0 |
| peptidase u32 | VDA_001478 | Not Available | Positive | 410376 - 412271 | 70661.0 |
| pyruvate formate-lyase | VDA_001479 | Not Available | Negative | 412516 - 414789 | 84192.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


