Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna reductase | VDA_001445 | Not Available | Positive | 364726 - 365979 | 45739.8 |
| peptide chain release factor 1 | VDA_001446 | Not Available | Positive | 366149 - 367237 | 40632.7 |
| polypeptide chain release factor methylase | VDA_001447 | Not Available | Positive | 367239 - 368087 | 30936.9 |
| protein sirb1 | VDA_001448 | Not Available | Positive | 368522 - 369331 | 31234.2 |
| 2-keto-3-deoxy-d-manno-octulosonate-8-phosphate synthase | VDA_001449 | Not Available | Positive | 369346 - 370200 | 31233.7 |
| serine transporter | VDA_001450 | Not Available | Positive | 370498 - 371751 | 45870.3 |
| methyl-accepting chemotaxis protein | VDA_001451 | Not Available | Negative | 371852 - 373735 | 68061.7 |
| methionine transporter mett | VDA_001452 | Not Available | Positive | 374038 - 375396 | 47165.5 |
| udp-sugar hydrolase | VDA_001453 | Not Available | Positive | 375861 - 377348 | 54508.9 |
| transcriptional regulator | VDA_001454 | Not Available | Positive | 377665 - 377970 | 10446.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


