Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_000006 | Not Available | Positive | 5020745 - 5021725 | 37301.4 |
| hypothetical protein | VDA_000007 | Not Available | Negative | 5022598 - 5023974 | 51581.2 |
| 2-methylthioadenine synthetase | VDA_000008 | Not Available | Negative | 5024787 - 5025887 | 41642.4 |
| uba/thif-type nad/fad binding protein | VDA_000009 | Not Available | Negative | 5026588 - 5028315 | 64961.1 |
| hypothetical protein | VDA_000010 | Not Available | Negative | 5028315 - 5029340 | 38629.6 |
| hypothetical protein | VDA_000011 | Not Available | Positive | 5030514 - 5030636 | 4925.71 |
| incf plasmid conjugative transfer pilus assembly protein trau | VDA_000012 | Not Available | Positive | 5032276 - 5033286 | 37368.0 |
| conjugative transfer protein trbc | VDA_000013 | Not Available | Positive | 5033626 - 5034273 | 23388.6 |
| hypothetical protein | VDA_000014 | Not Available | Positive | 5034270 - 5036084 | 66474.7 |
| incf plasmid conjugative transfer pilus assembly protein traf | VDA_000015 | Not Available | Positive | 5036081 - 5036839 | 28217.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


