Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_000085 | Not Available | Positive | 5006229 - 5006840 | 22818.7 |
| hypothetical type ii secretion protein | VDA_000086 | Not Available | Positive | 5006842 - 5008401 | 57810.1 |
| hypothetical protein | VDA_000087 | Not Available | Positive | 5008398 - 5009387 | 35685.1 |
| hypothetical protein | VDA_000088 | Not Available | Positive | 5009399 - 5009962 | 20191.0 |
| hypothetical type iv pilin pila | VDA_000089 | Not Available | Positive | 5010452 - 5011381 | 34779.6 |
| hypothetical protein | VDA_000001 | Not Available | Positive | 5013049 - 5014461 | 54978.4 |
| repa protein putative | VDA_000002 | Not Available | Positive | 5014730 - 5015794 | 40637.6 |
| type ii restriction enzyme psti (endonuclease psti) (r.psti) | VDA_000003 | Not Available | Negative | 5016050 - 5017030 | 37412.3 |
| modification methylase psti (adenine-specific methyltransferase psti) (m.psti) | VDA_000004 | Not Available | Positive | 5017158 - 5018672 | 56280.9 |
| hypothetical protein | VDA_000005 | Not Available | Negative | 5019235 - 5019615 | 14575.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


