Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin-1 | VDA_000159 | Not Available | Positive | 4886150 - 4887871 | 65161.6 |
| cytolysin and hemolysin hlya pore-forming toxin | VDA_000160 | Not Available | Negative | 4888475 - 4890286 | 68049.5 |
| hypothetical protein | VDA_000161 | Not Available | Negative | 4891751 - 4893457 | 64757.6 |
| hypothetical protein | VDA_000162 | Not Available | Negative | 4893511 - 4894581 | 37757.9 |
| pefa | VDA_000020 | Not Available | Positive | 4898492 - 4899031 | 18117.5 |
| usher protein | VDA_000021 | Not Available | Positive | 4899091 - 4901502 | 87576.6 |
| chaperone protein fane precursor | VDA_000022 | Not Available | Positive | 4901517 - 4902212 | 25779.6 |
| hypothetical protein | VDA_000023 | Not Available | Positive | 4902845 - 4903732 | 32035.0 |
| putative transposase | VDA_000024 | Not Available | Negative | 4903964 - 4904560 | 23250.6 |
| hypothetical protein | VDA_000025 | Not Available | Positive | 4905816 - 4906010 | 7277.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


