Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii/iv secretion system atp hydrolase tada/virb11/cpaf tada subfamily | VDA_000099 | Not Available | Positive | 4766146 - 4767426 | 46839.8 |
| flp pilus assembly protein tadb | VDA_000100 | Not Available | Positive | 4767426 - 4768346 | 35201.2 |
| type ii/iv secretion system protein tadc associated with flp pilus assembly | VDA_000101 | Not Available | Positive | 4768349 - 4769230 | 33222.6 |
| flp pilus assembly protein tadd | VDA_000102 | Not Available | Positive | 4769223 - 4769951 | 27743.4 |
| protein tadg associated with flp pilus assembly | VDA_000103 | Not Available | Positive | 4771019 - 4772329 | 49204.9 |
| lipoprotein precursor ompa family | VDA_000104 | Not Available | Positive | 4772358 - 4772990 | 23799.2 |
| site-specific recombinase resolvase family | VDA_000105 | Not Available | Positive | 4773966 - 4774643 | 25656.3 |
| hypothetical protein | VDA_000106 | Not Available | Negative | 4774985 - 4775611 | 24585.0 |
| hypothetical membrane spanning protein | VDA_000107 | Not Available | Positive | 4776429 - 4778108 | 65505.1 |
| hypothetical protein | VDA_000108 | Not Available | Negative | 4778996 - 4779832 | 31963.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


