Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| incf plasmid conjugative transfer pilus assembly protein trau | VDA_000274 | Not Available | Negative | 4745827 - 4746837 | 37429.9 |
| hypothetical protein | VDA_000090 | Not Available | Positive | 4748789 - 4749631 | 32351.0 |
| peyer's patch-specific virulence factor gipa (transposase) | VDA_000091 | Not Available | Negative | 4751686 - 4752537 | 32337.1 |
| chromosome (plasmid) partitioning protein para | VDA_000092 | Not Available | Positive | 4757206 - 4758453 | 46798.8 |
| chromosome (plasmid) partitioning protein parb | VDA_000093 | Not Available | Positive | 4758455 - 4759414 | 36553.8 |
| hypothetical protein | VDA_000094 | Not Available | Negative | 4759534 - 4760613 | 42474.5 |
| fimbrial protein precursor | VDA_000095 | Not Available | Positive | 4761581 - 4761790 | 7259.79 |
| flp pilus assembly protein rcpc/cpab | VDA_000096 | Not Available | Positive | 4762267 - 4763070 | 29046.7 |
| type ii/iv secretion system secretin rcpa/cpac associated with flp pilus assembly | VDA_000097 | Not Available | Positive | 4763079 - 4764407 | 48726.3 |
| type ii/iv secretion system atpase tadz/cpae associated with flp pilus assembly | VDA_000098 | Not Available | Positive | 4764913 - 4766142 | 46081.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


