Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ispsy3 transposase | VDA_000222 | Not Available | Negative | 4644885 - 4645586 | 28042.2 |
| hydrophilic protein vira protein | VDA_000223 | Not Available | Positive | 4649223 - 4649924 | 26089.6 |
| putative protein-tyrosine phosphatase aop effector aoph | VDA_000224 | Not Available | Negative | 4652108 - 4653826 | 61800.3 |
| putative transposase | VDA_000225 | Not Available | Positive | 4654358 - 4654825 | 18020.8 |
| adp-ribosyltransferase toxin aext (exoenzyme t) | VDA_000226 | Not Available | Negative | 4655037 - 4656581 | 54921.7 |
| site-specific recombinase resolvase family | VDA_000227 | Not Available | Negative | 4660805 - 4661434 | 24047.1 |
| putative transposase | VDA_000228 | Not Available | Positive | 4661731 - 4662417 | 26922.4 |
| hypothetical protein | VDA_000229 | Not Available | Positive | 4662615 - 4663649 | 39204.7 |
| hypothetical protein | VDA_000230 | Not Available | Positive | 4664196 - 4664984 | 30837.4 |
| ribonucleoside-diphosphate reductase alpha subunit | VDA_000231 | Not Available | Positive | 4665521 - 4667710 | 81550.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


