Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion inner membrane protein hrpy | VDA_000202 | Not Available | Positive | 4607393 - 4608451 | 39054.3 |
| putative protein-tyrosine phosphatase aop effector aoph | VDA_000203 | Not Available | Positive | 4609251 - 4610969 | 61746.2 |
| hypothetical protein | VDA_000204 | Not Available | Negative | 4612796 - 4613857 | 39872.0 |
| hypothetical protein | VDA_000205 | Not Available | Negative | 4614621 - 4614815 | 7265.51 |
| hypothetical protein | VDA_000206 | Not Available | Negative | 4615476 - 4617146 | 61387.0 |
| putative transposase | VDA_000207 | Not Available | Positive | 4617881 - 4618537 | 26022.3 |
| type iii secretion thermoregulatory protein (lcrf,virf,transcription regulation of virulence plasmid) | VDA_000208 | Not Available | Negative | 4618721 - 4619602 | 34051.7 |
| outer membrane protein | VDA_000209 | Not Available | Negative | 4621966 - 4622787 | 28661.8 |
| dna-binding response regulator | VDA_000210 | Not Available | Positive | 4624627 - 4625337 | 27213.3 |
| putative transposase | VDA_000211 | Not Available | Negative | 4625546 - 4626232 | 26822.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


