Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion lcrg inhibitor (lcrv,secretion and targeting control protein v antigen) | VDA_000192 | Not Available | Negative | 4594444 - 4596270 | 67480.2 |
| type iii secretion inner membrane channel protein | VDA_000193 | Not Available | Negative | 4597044 - 4599167 | 77941.7 |
| type iii secretion system effector delivery regulator tyea | VDA_000194 | Not Available | Negative | 4600239 - 4600427 | 7456.69 |
| type iii secretion regulator yopn | VDA_000195 | Not Available | Negative | 4600504 - 4601397 | 33099.0 |
| type iii secretion cytoplasmic atp synthase | VDA_000196 | Not Available | Positive | 4601642 - 4602907 | 45681.3 |
| type iii secretion spans bacterial envelope protein (ysco) | VDA_000197 | Not Available | Positive | 4603192 - 4603365 | 6881.98 |
| type iii secretion protein (yscp) | VDA_000198 | Not Available | Positive | 4603375 - 4604703 | 48960.8 |
| type iii secretion inner membrane protein yscq | VDA_000199 | Not Available | Positive | 4604703 - 4605668 | 35931.9 |
| yop virulence translocation protein r | VDA_000200 | Not Available | Positive | 4605665 - 4606315 | 24268.4 |
| type iii secretion protein spar | VDA_000201 | Not Available | Positive | 4606592 - 4607374 | 29002.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


