Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| resolvase | VDA_000172 | Not Available | Negative | 4561337 - 4561948 | 22168.7 |
| hypothetical protein | VDA_000173 | Not Available | Negative | 4561956 - 4562786 | 31776.6 |
| tn5044 transposase | VDA_000174 | Not Available | Positive | 4563025 - 4563564 | 20629.1 |
| tnpa | VDA_000175 | Not Available | Positive | 4563646 - 4565994 | 90505.7 |
| magnesium transporting atpase p-type 1 | VDA_000176 | Not Available | Negative | 4569030 - 4571012 | 72763.2 |
| hypothetical protein | VDA_000177 | Not Available | Positive | 4570963 - 4571457 | 17482.3 |
| transposase | VDA_000178 | Not Available | Positive | 4573975 - 4577022 | 118063.0 |
| chromosome (plasmid) partitioning protein para | VDA_000179 | Not Available | Positive | 4578573 - 4579739 | 44362.4 |
| chromosome (plasmid) partitioning protein parb | VDA_000180 | Not Available | Positive | 4579739 - 4580788 | 39271.7 |
| type iii secretion cytoplasmic protein (yscl) | VDA_000181 | Not Available | Negative | 4582579 - 4583214 | 23554.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


