Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | VDA_001424 | Not Available | Negative | 337883 - 339004 | 40839.8 |
| penicillin-binding protein 2 (pbp-2) | VDA_001425 | Not Available | Negative | 339001 - 340962 | 74110.2 |
| hypothetical protein | VDA_001426 | Not Available | Negative | 340969 - 341406 | 16274.6 |
| hypothetical protein | VDA_001427 | Not Available | Negative | 341446 - 341763 | 11889.3 |
| dna polymerase iii delta subunit | VDA_001428 | Not Available | Negative | 341947 - 342975 | 39155.8 |
| lps-assembly lipoprotein rlpb precursor | VDA_001429 | Not Available | Negative | 342972 - 343658 | 25460.2 |
| leucyl-trna synthetase | VDA_001430 | Not Available | Negative | 343801 - 346377 | 97110.2 |
| hypothetical protein | VDA_001431 | Not Available | Positive | 346737 - 347219 | 18038.6 |
| hypothetical protein | VDA_001432 | Not Available | Negative | 347336 - 348031 | 24433.8 |
| apolipoprotein n-acyltransferase/copper homeostasis protein cute | VDA_001433 | Not Available | Negative | 348148 - 349701 | 57859.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


