Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | VDA_001162 | Not Available | Negative | 4527112 - 4527699 | 22410.5 |
| putative alpha-1,2-mannosidase | VDA_001163 | Not Available | Positive | 4528083 - 4530596 | 94396.8 |
| alpha-1,2-mannosidase | VDA_001164 | Not Available | Positive | 4530626 - 4533463 | 105476.0 |
| hypothetical protein | VDA_001165 | Not Available | Positive | 4534388 - 4534501 | 4085.1 |
| putative alpha-1,2-mannosidase | VDA_001166 | Not Available | Positive | 4534733 - 4537162 | 89875.7 |
| hypothetical protein | VDA_001167 | Not Available | Positive | 4537545 - 4538144 | 23370.1 |
| Trna-sec(p) | Not Available | Not Available | Positive | 4538409 - 4538496 | Not Available |
| l-seryl-trna(sec) selenium transferase | VDA_001168 | Not Available | Positive | 4538605 - 4540032 | 52479.6 |
| selenocysteine-specific translation elongation factor | VDA_001169 | Not Available | Positive | 4540032 - 4541855 | 67381.2 |
| hypothetical membrane protein | VDA_001170 | Not Available | Negative | 4542475 - 4543125 | 23657.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


