Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator luxr family | VDA_001142 | Not Available | Negative | 4488666 - 4489376 | 26871.4 |
| transcriptional regulator arac/xyls family | VDA_001143 | Not Available | Positive | 4490338 - 4491105 | 28615.1 |
| proline dehydrogenase (proline oxidase)/delta-1-pyrroline-5-carboxylate dehydrogenase | VDA_001144 | Not Available | Positive | 4491395 - 4494538 | 116459.0 |
| delta 1-pyrroline-5-carboxylate dehydrogenase domain protein | VDA_001145 | Not Available | Positive | 4494538 - 4495203 | 24598.0 |
| proline/sodium symporter putp | VDA_001146 | Not Available | Positive | 4495372 - 4496868 | 53122.5 |
| cbs domain protein | VDA_001147 | Not Available | Negative | 4496930 - 4498255 | 48719.8 |
| hypothetical protein | VDA_001148 | Not Available | Negative | 4498386 - 4499444 | 38254.8 |
| cell wall endopeptidase family m23/m37 | VDA_001149 | Not Available | Negative | 4499787 - 4501127 | 49877.7 |
| asma protein | VDA_001150 | Not Available | Negative | 4501959 - 4505897 | 143102.0 |
| membrane-bound lytic murein transglycosylase c precursor | VDA_001151 | Not Available | Negative | 4506172 - 4507299 | 42702.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


