Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system n-acetylgalactosamine-specific iid component | VDA_001122 | Not Available | Negative | 4458282 - 4459166 | 32061.9 |
| pts system n-acetylgalactosamine-specific iic component | VDA_001123 | Not Available | Negative | 4459156 - 4459938 | 27455.4 |
| hypothetical protein | VDA_001124 | Not Available | Positive | 4461684 - 4462619 | 36288.0 |
| hypothetical protein | VDA_001125 | Not Available | Negative | 4462822 - 4463004 | 6833.26 |
| choloylglycine hydrolase | VDA_001126 | Not Available | Negative | 4463493 - 4464584 | 39997.3 |
| putative xanthine/uracil permease | VDA_001127 | Not Available | Negative | 4464749 - 4466110 | 46560.4 |
| putative inner membrane protein | VDA_001128 | Not Available | Positive | 4466571 - 4467875 | 45098.6 |
| serine transporter | VDA_001129 | Not Available | Positive | 4468447 - 4469775 | 48589.8 |
| transcriptional regulator lysr family | VDA_001130 | Not Available | Negative | 4469855 - 4470763 | 34284.5 |
| putative membrane protein | VDA_001131 | Not Available | Negative | 4470939 - 4471829 | 32382.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


