Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system n-acetylgalactosamine-specific iib component | VDA_001080 | Not Available | Negative | 4408217 - 4408717 | 18172.8 |
| putative tagatose-6-phosphate ketose/aldose isomerase | VDA_001081 | Not Available | Negative | 4408736 - 4409908 | 43053.3 |
| tagatose-6-phosphate kinase agaz | VDA_001082 | Not Available | Negative | 4409919 - 4411199 | 47336.9 |
| transcriptional repressor of aga operon | VDA_001083 | Not Available | Negative | 4411249 - 4412025 | 28150.7 |
| choline-sulfatase | VDA_001084 | Not Available | Positive | 4412445 - 4413998 | 59010.7 |
| n-acetylneuraminic acid outer membrane channel protein nanc | VDA_001085 | Not Available | Positive | 4414096 - 4414824 | 28586.4 |
| threonine efflux protein | VDA_001086 | Not Available | Negative | 4414908 - 4415534 | 22865.7 |
| pole remodelling regulatory diguanylate cyclase | VDA_001087 | Not Available | Positive | 4415685 - 4416905 | 45846.2 |
| hypothetical protein | VDA_001088 | Not Available | Negative | 4417351 - 4418316 | 37558.1 |
| hypothetical protein | VDA_001089 | Not Available | Positive | 4418568 - 4419344 | 30985.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


