Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol peroxidase bcp-type | VDA_001414 | Not Available | Negative | 330036 - 330308 | 10415.6 |
| glycine cleavage system transcriptional antiactivator gcvr | VDA_001415 | Not Available | Negative | 330531 - 331088 | 20962.8 |
| dihydrodipicolinate synthase | VDA_001416 | Not Available | Positive | 331392 - 332270 | 31111.6 |
| nlpb lipoprotein component of the protein assembly complex | VDA_001417 | Not Available | Positive | 332302 - 333315 | 37300.8 |
| lipoate synthase | VDA_001418 | Not Available | Negative | 333399 - 334313 | 34348.4 |
| octanoate-[acyl-carrier-protein]-protein-n- octanoyltransferase | VDA_001419 | Not Available | Negative | 334367 - 335014 | 23985.7 |
| hypothetical protein | VDA_001420 | Not Available | Negative | 335134 - 335406 | 10156.3 |
| d-alanyl-d-alanine carboxypeptidase | VDA_001421 | Not Available | Negative | 335602 - 336459 | 31788.9 |
| hypothetical protein | VDA_001422 | Not Available | Positive | 336662 - 336787 | 4024.64 |
| rare lipoprotein a precursor | VDA_001423 | Not Available | Negative | 337013 - 337882 | 32356.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


