Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator gntr family | VDA_001070 | Not Available | Positive | 4399024 - 4399677 | 24856.4 |
| hypothetical protein | VDA_001071 | Not Available | Positive | 4400574 - 4401251 | 24885.4 |
| endoxylanase precursor | VDA_001072 | Not Available | Negative | 4401305 - 4402024 | 27142.2 |
| hypothetical protein | VDA_001073 | Not Available | Negative | 4402093 - 4403136 | 39441.5 |
| 2-deoxy-d-gluconate 3-dehydrogenase | VDA_001074 | Not Available | Negative | 4403154 - 4403912 | 26870.1 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | VDA_001075 | Not Available | Negative | 4404012 - 4404842 | 31066.1 |
| n-acetylglucosamine-6-phosphate deacetylase | VDA_001076 | Not Available | Negative | 4404875 - 4406029 | 41538.6 |
| pts system n-acetylgalactosamine- and galactosamine-specific iia component | VDA_001077 | Not Available | Negative | 4406031 - 4406474 | 15711.0 |
| pts system n-acetylgalactosamine-specific iid component | VDA_001078 | Not Available | Negative | 4406535 - 4407428 | 32112.9 |
| pts system n-acetylgalactosamine-specific iic component | VDA_001079 | Not Available | Negative | 4407418 - 4408182 | 26893.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


