Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tagatose-1,6-bisphosphate aldolase agay | VDA_001060 | Not Available | Negative | 4383786 - 4384640 | 31329.6 |
| hypothetical protein | VDA_001061 | Not Available | Negative | 4384921 - 4386459 | 58840.5 |
| n-acetylgalactosamine 6-sulfate sulfatase (galns) | VDA_001062 | Not Available | Negative | 4386648 - 4388279 | 59895.9 |
| galns arylsulfatase regulator (fe-s oxidoreductase) | VDA_001063 | Not Available | Negative | 4388351 - 4389604 | 47213.0 |
| chondroitinase (chondroitin lyase) | VDA_001064 | Not Available | Positive | 4389864 - 4392944 | 114533.0 |
| uncharacterized membrane protein | VDA_001065 | Not Available | Positive | 4393079 - 4393633 | 19968.1 |
| hyaluronate lyase precursor | VDA_001066 | Not Available | Negative | 4393673 - 4396093 | 90984.8 |
| protein of unknown function duf6 transmembrane | VDA_001067 | Not Available | Negative | 4396359 - 4397315 | 33721.1 |
| altronate hydrolase | VDA_001068 | Not Available | Negative | 4397366 - 4398541 | 41668.4 |
| putative altronate dehydratase | VDA_001069 | Not Available | Negative | 4398541 - 4398798 | 9435.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


