Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoaspartyl aminopeptidase | VDA_001040 | Not Available | Positive | 4359738 - 4360763 | 36227.1 |
| adenylosuccinate synthetase | VDA_001041 | Not Available | Negative | 4360860 - 4362116 | 45686.5 |
| transcriptional regulator lysr family | VDA_001042 | Not Available | Positive | 4362273 - 4363187 | 33917.1 |
| l-proline glycine betaine abc transport atp-binding protein prov | VDA_001043 | Not Available | Negative | 4363253 - 4364530 | 47106.2 |
| l-proline glycine betaine abc transport system permease protein prow | VDA_001044 | Not Available | Negative | 4364530 - 4365420 | 32342.7 |
| hypothetical abc transporter substrate binding protein | VDA_001045 | Not Available | Negative | 4365578 - 4366579 | 36647.5 |
| hypothetical protein | VDA_001046 | Not Available | Positive | 4366933 - 4367745 | 29694.3 |
| protein ygiw precursor | VDA_001047 | Not Available | Negative | 4368082 - 4368453 | 13067.5 |
| transcriptional regulator | VDA_001048 | Not Available | Negative | 4368696 - 4369307 | 23339.3 |
| probable co/zn/cd efflux system membrane fusion protein | VDA_001049 | Not Available | Positive | 4369507 - 4370613 | 40126.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


