Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | VDA_001010 | Not Available | Negative | 4319096 - 4320541 | 54829.9 |
| putative dna-binding response regulator | VDA_001011 | Not Available | Negative | 4321165 - 4321890 | 27197.7 |
| hypothetical protein | VDA_001012 | Not Available | Negative | 4322007 - 4322597 | 21525.1 |
| diguanylate cyclase | VDA_001013 | Not Available | Positive | 4322800 - 4323936 | 43959.3 |
| hypothetical transcriptional regulator | VDA_001014 | Not Available | Negative | 4325180 - 4326058 | 33145.7 |
| multidrug resistance efflux pump | VDA_001015 | Not Available | Positive | 4326162 - 4327535 | 50047.6 |
| transcriptional regulator | VDA_001016 | Not Available | Negative | 4327562 - 4328500 | 35171.2 |
| nhap-type na+/h+ and k+/h+ antiporter | VDA_001017 | Not Available | Positive | 4328727 - 4330517 | 65524.1 |
| hypothetical protein | VDA_001018 | Not Available | Negative | 4331784 - 4332671 | 34124.1 |
| hypothetical protein | VDA_001019 | Not Available | Negative | 4332637 - 4333908 | 49168.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


