Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_000982 | Not Available | Positive | 4284873 - 4285907 | 38901.2 |
| [nife] hydrogenase metallocenter assembly protein hype | VDA_000983 | Not Available | Negative | 4285990 - 4286982 | 35595.6 |
| [nife] hydrogenase metallocenter assembly protein hypd | VDA_000984 | Not Available | Negative | 4286993 - 4288117 | 41171.1 |
| hydrogenase assembly chaperone hypc/hupf | VDA_000985 | Not Available | Negative | 4288117 - 4288302 | 6843.43 |
| [nife] hydrogenase metallocenter assembly protein hypf | VDA_000986 | Not Available | Negative | 4288401 - 4290761 | 88037.3 |
| hypothetical protein | VDA_000987 | Not Available | Negative | 4290916 - 4291857 | 35448.5 |
| hypothetical protein | VDA_000988 | Not Available | Positive | 4292725 - 4292883 | 6206.33 |
| pathogenicity island-encoded protein d | VDA_000989 | Not Available | Positive | 4293261 - 4294733 | 54853.6 |
| aspartate aminotransferase | VDA_000990 | Not Available | Negative | 4294870 - 4296039 | 44621.0 |
| na(+)/(h)+ antiporter nhac | VDA_000991 | Not Available | Negative | 4296098 - 4297546 | 50655.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


