Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylglycinamide formyltransferase | VDA_001403 | Not Available | Negative | 313693 - 314340 | 23455.9 |
| phosphoribosylformylglycinamidine cyclo-ligase | VDA_001404 | Not Available | Negative | 314344 - 315384 | 37073.2 |
| uracil phosphoribosyltransferase | VDA_001405 | Not Available | Positive | 315581 - 316207 | 22742.8 |
| membrane fusion protein of rnd family multidrug efflux pump | VDA_001406 | Not Available | Positive | 316872 - 318068 | 42737.2 |
| inner membrane efflux transporter of rnd family multidrug efflux pump | VDA_001407 | Not Available | Positive | 318085 - 321195 | 112348.0 |
| hypothetical protein | VDA_001409 | Not Available | Positive | 323087 - 324253 | 42617.5 |
| trp repressor-binding protein | VDA_001410 | Not Available | Negative | 324848 - 325423 | 20779.1 |
| arsenate reductase | VDA_001411 | Not Available | Negative | 325424 - 325723 | 11065.4 |
| zinc metalloprotease | VDA_001412 | Not Available | Negative | 325783 - 327246 | 54731.9 |
| permease perm | VDA_001413 | Not Available | Positive | 327682 - 328761 | 39622.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


