Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema protein | VDA_000972 | Not Available | Positive | 4274210 - 4274686 | 17970.3 |
| hypothetical protein | VDA_000973 | Not Available | Positive | 4274687 - 4275436 | 26768.9 |
| hypothetical protein | VDA_000974 | Not Available | Positive | 4275439 - 4276056 | 23398.5 |
| hypothetical protein | VDA_000975 | Not Available | Positive | 4276457 - 4277191 | 27551.1 |
| ribosomal large subunit pseudouridine synthase a | VDA_000976 | Not Available | Positive | 4277266 - 4278948 | 64014.4 |
| arac-type dna-binding domain-containing protein | VDA_000977 | Not Available | Negative | 4279975 - 4280859 | 33244.0 |
| iron-containing alcohol dehydrogenase | VDA_000978 | Not Available | Positive | 4281019 - 4282167 | 41774.7 |
| hnh nuclease | VDA_000979 | Not Available | Positive | 4282352 - 4283188 | 31782.0 |
| transcriptional regulators lysr family | VDA_000980 | Not Available | Negative | 4283250 - 4284152 | 33137.9 |
| thioredoxin peroxidase | VDA_000981 | Not Available | Positive | 4284598 - 4284870 | 10111.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


