Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoate-protein ligase a | VDA_000886 | Not Available | Positive | 4157857 - 4158873 | 38471.4 |
| cobalt-zinc-cadmium resistance protein | VDA_000887 | Not Available | Negative | 4158971 - 4159909 | 34344.8 |
| cystathionine beta-lyase | VDA_000888 | Not Available | Negative | 4160891 - 4162093 | 44527.1 |
| protein-export membrane protein secf | VDA_000889 | Not Available | Negative | 4162204 - 4163049 | 30396.2 |
| protein-export membrane protein secd | VDA_000890 | Not Available | Negative | 4163120 - 4164883 | 63824.7 |
| hypothetical protein | VDA_000891 | Not Available | Negative | 4165131 - 4165688 | 21324.1 |
| 2-hydroxy-3-oxopropionate reductase | VDA_000892 | Not Available | Positive | 4165921 - 4166790 | 30959.0 |
| putative nupc family protein (permease) | VDA_000893 | Not Available | Negative | 4166879 - 4167934 | 36490.5 |
| leucine-rich repeat protein | VDA_000894 | Not Available | Positive | 4168542 - 4169111 | 20857.7 |
| putative acetyltransferase | VDA_000895 | Not Available | Positive | 4169806 - 4170354 | 20743.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


