Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sgrr sugar-phosphate stress transcriptional activator of sgrs small rna | VDA_000876 | Not Available | Negative | 4119628 - 4121316 | 65091.8 |
| hypothetical nitroreductase | VDA_000877 | Not Available | Positive | 4121577 - 4122305 | 27727.4 |
| sensor protein luxq | VDA_000878 | Not Available | Positive | 4123648 - 4125360 | 64642.8 |
| hypothetical protein | VDA_000879 | Not Available | Negative | 4125471 - 4148972 | 812712.0 |
| abc-type protease exporter membrane fusion protein (mfp) family component prte/apre | VDA_000880 | Not Available | Positive | 4149287 - 4150681 | 51592.2 |
| agglutination protein | VDA_000881 | Not Available | Positive | 4150735 - 4151994 | 47238.3 |
| outer membrane protein | VDA_000882 | Not Available | Positive | 4152032 - 4152598 | 20407.8 |
| hypothetical protein | VDA_000883 | Not Available | Positive | 4152604 - 4153275 | 25696.2 |
| ggdef and eal domain-containing protein | VDA_000884 | Not Available | Positive | 4153275 - 4155209 | 72718.0 |
| abc transporter transmembrane region | VDA_000885 | Not Available | Positive | 4155212 - 4157332 | 78229.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


