Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_001393 | Not Available | Negative | 300961 - 301653 | 25985.0 |
| membrane-bound lytic murein transglycosylase d precursor | VDA_001394 | Not Available | Negative | 301669 - 303219 | 58284.9 |
| hydroxyacylglutathione hydrolase | VDA_001395 | Not Available | Negative | 303290 - 304048 | 27932.0 |
| hypothetical sam-dependent methyltransferase | VDA_001396 | Not Available | Positive | 304090 - 304881 | 30144.4 |
| dna polymerase iii epsilon subunit | VDA_001397 | Not Available | Positive | 305395 - 306120 | 26964.4 |
| hypothetical protein | VDA_001398 | Not Available | Positive | 306122 - 307357 | 47017.6 |
| acyl-coa dehydrogenase short-chain specific | VDA_001399 | Not Available | Negative | 307386 - 309836 | 89625.7 |
| hypothetical sulfate permease family protein | VDA_001400 | Not Available | Positive | 310364 - 312070 | 60556.2 |
| phosphoheptose isomerase | VDA_001401 | Not Available | Positive | 312150 - 312728 | 20927.0 |
| predicted glutamine amidotransferase | VDA_001402 | Not Available | Positive | 312785 - 313564 | 29291.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


