Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_000796 | Not Available | Positive | 4008610 - 4009242 | 23534.0 |
| putative transcriptional regulator cpxr | VDA_000797 | Not Available | Negative | 4009298 - 4009996 | 26599.8 |
| cytosine/purine/uracil/thiamine/allantoin permease family protein | VDA_000798 | Not Available | Positive | 4010841 - 4012082 | 43249.6 |
| cytosine deaminase | VDA_000799 | Not Available | Positive | 4012091 - 4013383 | 48495.4 |
| secreted trypsin-like serine protease | VDA_000800 | Not Available | Negative | 4013474 - 4014679 | 43002.0 |
| alkylphosphonate utilization operon protein phna | VDA_000801 | Not Available | Positive | 4015125 - 4015700 | 20935.8 |
| transcriptional regulator lysr family | VDA_000802 | Not Available | Positive | 4015889 - 4016788 | 33968.9 |
| sialic acid-induced transmembrane protein yjht(nanm) possible mutarotase | VDA_000803 | Not Available | Negative | 4016858 - 4018009 | 41752.2 |
| putative glutathione s-transferase | VDA_000804 | Not Available | Positive | 4018216 - 4018872 | 25774.3 |
| maltose o-acetyltransferase | VDA_000805 | Not Available | Negative | 4018876 - 4019433 | 20254.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


