Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate hydratase class ii | VDA_000786 | Not Available | Positive | 3994938 - 3996317 | 48902.0 |
| sodium-dependent transporter | VDA_000787 | Not Available | Positive | 3997046 - 3997906 | 30884.8 |
| tpr repeat protein sel1 subfamily | VDA_000788 | Not Available | Positive | 3998072 - 3999073 | 37999.0 |
| tpr domain protein putative component of tonb system | VDA_000789 | Not Available | Negative | 3999747 - 4000925 | 44527.9 |
| ferric siderophore transport system binding protein tonb | VDA_000790 | Not Available | Negative | 4000922 - 4001578 | 23988.3 |
| exbd2 protein | VDA_000791 | Not Available | Negative | 4001595 - 4001732 | 4667.59 |
| mota/tolq/exbb proton channel family protein | VDA_000792 | Not Available | Negative | 4002529 - 4003893 | 48936.2 |
| tonb system biopolymer transport component | VDA_000793 | Not Available | Negative | 4003890 - 4004672 | 29132.8 |
| ferrichrome-iron receptor | VDA_000794 | Not Available | Negative | 4004792 - 4006867 | 76501.3 |
| hypothetical two-component system sensor kinase | VDA_000795 | Not Available | Negative | 4007074 - 4008444 | 51951.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


