Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_001381 | Not Available | Negative | 282389 - 283087 | 25603.5 |
| methionine abc transporter substrate-binding protein | VDA_001382 | Not Available | Negative | 283694 - 284518 | 29651.2 |
| methionine abc transporter permease protein | VDA_001383 | Not Available | Negative | 284587 - 285273 | 23847.3 |
| methionine abc transporter atp-binding protein | VDA_001384 | Not Available | Negative | 285263 - 286297 | 37651.9 |
| d-glycero-d-manno-heptose 1,7-bisphosphate phosphatase | VDA_001385 | Not Available | Positive | 286645 - 287199 | 20449.3 |
| putative transmembrane abc transporter protein | VDA_001386 | Not Available | Positive | 287439 - 288470 | 38256.2 |
| oligopeptide transport system permease protein oppc | VDA_001387 | Not Available | Positive | 288467 - 289510 | 38985.6 |
| oligopeptide abc transporter atp-binding protein | VDA_001388 | Not Available | Positive | 289521 - 290408 | 33258.6 |
| abc-type oligopeptide transport system atpase component | VDA_001389 | Not Available | Positive | 290422 - 291252 | 31053.2 |
| abc-type dipeptide transport system component | VDA_001390 | Not Available | Positive | 291277 - 293106 | 70273.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


