Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riorf46 protein | VDA_000636 | Not Available | Negative | 3791951 - 3793315 | 53108.9 |
| hypothetical protein | VDA_000637 | Not Available | Positive | 3794534 - 3795754 | 45721.3 |
| choloylglycine hydrolase-like protein | VDA_000638 | Not Available | Positive | 3795854 - 3796942 | 39440.1 |
| translation initiation factor sui1-related protein | VDA_000639 | Not Available | Negative | 3797013 - 3797324 | 11076.6 |
| had superfamily hydrolase | VDA_000640 | Not Available | Positive | 3797447 - 3798046 | 22840.5 |
| protein of unknown function duf785 | VDA_000641 | Not Available | Positive | 3798145 - 3798651 | 18677.4 |
| integrase-like protein | VDA_000642 | Not Available | Positive | 3799360 - 3800331 | 37091.5 |
| d-alanine--d-alanine ligase | VDA_000643 | Not Available | Negative | 3800424 - 3801287 | 32027.7 |
| putative acetyltransferase | VDA_000644 | Not Available | Negative | 3801620 - 3802174 | 20238.2 |
| damx-related protein | VDA_000645 | Not Available | Negative | 3802351 - 3802938 | 21161.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


