Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide synthase | VDA_001371 | Not Available | Positive | 268560 - 269702 | 42735.3 |
| ribonuclease hii | VDA_001372 | Not Available | Positive | 269708 - 270313 | 22002.6 |
| dna polymerase iii alpha subunit | VDA_001373 | Not Available | Positive | 270431 - 273910 | 129996.0 |
| acetyl-coenzyme a carboxyl transferase alpha chain | VDA_001374 | Not Available | Positive | 273976 - 274935 | 35220.5 |
| trna(ile)-lysidine synthetase | VDA_001375 | Not Available | Positive | 275000 - 276403 | 53155.8 |
| hypothetical d-alanine-d-alanine ligase b | VDA_001376 | Not Available | Positive | 276555 - 277466 | 33382.3 |
| amino acid permease | VDA_001377 | Not Available | Positive | 277670 - 278881 | 42917.3 |
| hypothetical protein | VDA_001378 | Not Available | Negative | 278947 - 279111 | 6342.76 |
| diguanylate cyclase (ggdef domain) with pas/pac sensor | VDA_001379 | Not Available | Negative | 279483 - 280343 | 33259.4 |
| prolyl-trna synthetase | VDA_001380 | Not Available | Negative | 280539 - 282257 | 63301.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


