Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-enoate reductase (two distinct nad(fad)-dependent dehydrogenase domains) | VDA_000546 | Not Available | Negative | 3667049 - 3669070 | 73998.4 |
| transcriptional regulator lysr family | VDA_000547 | Not Available | Positive | 3669368 - 3670282 | 35052.8 |
| hypothetical protein | VDA_000548 | Not Available | Positive | 3670400 - 3671230 | 30677.9 |
| metal-dependent hydrolase | VDA_000549 | Not Available | Positive | 3671267 - 3672934 | 62721.4 |
| permease | VDA_000550 | Not Available | Positive | 3672990 - 3674627 | 57350.4 |
| major facilitator superfamily mfs_1 | VDA_000551 | Not Available | Positive | 3674680 - 3676245 | 57461.1 |
| 4-hydroxybutyrate coa-transferase | VDA_000552 | Not Available | Positive | 3677515 - 3678822 | 46787.8 |
| enoyl-coa hydratase/delta(3)-cis-delta(2)-trans-enoyl-coa isomerase/3-hydroxyacyl-coa dehydrogenase/3-hydroxybutyryl-coa epimerase | VDA_000553 | Not Available | Positive | 3678839 - 3680986 | 78607.5 |
| 3-ketoacyl-coa thiolase | VDA_000554 | Not Available | Positive | 3681001 - 3682164 | 41222.1 |
| aspartate aminotransferase | VDA_000555 | Not Available | Positive | 3682713 - 3683891 | 42823.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


