Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | VDA_000536 | Not Available | Positive | 3652759 - 3654336 | 57339.0 |
| atp-dependent rna helicase dbpa | VDA_000537 | Not Available | Positive | 3654505 - 3655818 | 47824.9 |
| hypothetical protein | VDA_000538 | Not Available | Negative | 3655900 - 3657378 | 54267.4 |
| outer membrane protein a precursor | VDA_000539 | Not Available | Positive | 3657767 - 3658774 | 36876.6 |
| hypothetical protein | VDA_000540 | Not Available | Negative | 3659638 - 3660069 | 16738.8 |
| predicted membrane-associated metal-dependent hydrolase | VDA_000541 | Not Available | Positive | 3660460 - 3662100 | 61990.9 |
| transglycosylase slt family | VDA_000542 | Not Available | Negative | 3662160 - 3663611 | 55684.9 |
| n-acetylmuramic acid 6-phosphate etherase | VDA_000543 | Not Available | Positive | 3663833 - 3664729 | 31305.9 |
| hypothetical protein | VDA_000544 | Not Available | Positive | 3665451 - 3665615 | 5823.91 |
| hypothetical protein | VDA_000545 | Not Available | Positive | 3666761 - 3666970 | 7017.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


